RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Proteobacteria Gammaproteobacteria Moraxellales Moraxellaceae Acinetobacter Acinetobacter baumannii 13 6733 HMP/UHGG
Actinobacteria Coriobacteriia Eggerthellales Eggerthellaceae Adlercreutzia Adlercreutzia equolifaciens 1 14 UHGG
Firmicutes Tissierellia Tissierellales Peptoniphilaceae Anaerococcus Anaerococcus hydrogenalis 2 4 HMP/UHGG
Firmicutes Tissierellia Tissierellales Peptoniphilaceae Anaerococcus Anaerococcus senegalensis 1 2 UHGG
Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides acidifaciens 1 19 UHGG
Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides mediterraneensis 1 4 UHGG
Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium animalis 3 117 HMP/UHGG
Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium scardovii 1 5 UHGG
Firmicutes Clostridia Eubacteriales Lachnospiraceae Blautia Blautia wexlerae 1 87 UHGG
Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae Bordetella Bordetella avium 1 26 HMP