RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Firmicutes Tissierellia Tissierellales Peptoniphilaceae Peptoniphilus Peptoniphilus senegalensis 1 2 UHGG
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas extremaustralis 1 6 UHGG
Firmicutes Tissierellia Tissierellales Tissierellaceae Sporanaerobacter Sporanaerobacter acetigenes 1 2 UHGG
Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus epidermidis 6 1256 HMP/UHGG
Proteobacteria Gammaproteobacteria Cellvibrionales Cellvibrionaceae Teredinibacter Teredinibacter turnerae 1 9 HMP
Proteobacteria Alphaproteobacteria Rickettsiales Anaplasmataceae Wolbachia Wolbachia endosymbiont of Brugia malayi 1 2 HMP
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Enterobacter Enterobacter mori 1 23 UHGG
Proteobacteria Alphaproteobacteria Rickettsiales Rickettsiaceae Rickettsia Rickettsia bellii 1 5 HMP
Actinobacteria Actinomycetia Pseudonocardiales Pseudonocardiaceae Saccharomonospora Saccharomonospora viridis 1 3 HMP
Firmicutes Negativicutes Acidaminococcales Acidaminococcaceae Acidaminococcus Acidaminococcus intestini 2 9 HMP/UHGG