RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter fetus 2 97 UHGG
Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter ureolyticus 1 14 UHGG
Actinobacteria Actinomycetia Corynebacteriales Corynebacteriaceae Corynebacterium Corynebacterium amycolatum 2 30 HMP/UHGG
Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Lactiplantibacillus pentosus 1 62 UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Pectobacteriaceae Pectobacterium Pectobacterium carotovorum 1 54 HMP
Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella nigrescens 1 10 UHGG
Proteobacteria Alphaproteobacteria Rickettsiales Rickettsiaceae Rickettsia Rickettsia prowazekii 1 12 HMP
Firmicutes Bacilli Lactobacillales Lactobacillaceae Weissella Weissella confusa 1 85 UHGG
Firmicutes Clostridia Eubacteriales Lachnospiraceae Bariatricus Bariatricus massiliensis 1 6 UHGG
Chlamydiae Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia abortus 1 40 HMP