RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Firmicutes Clostridia Eubacteriales Clostridiaceae Beduini Beduini massiliensis 1 2 UHGG
Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium angulatum 2 6 HMP/UHGG
Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium bifidum 2 116 HMP/UHGG
Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium thermacidophilum 1 3 UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Cedecea Cedecea davisae 1 7 UHGG
Firmicutes Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium niameyense 1 3 UHGG
Firmicutes Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium novyi 1 10 HMP
Actinobacteria Actinomycetia Corynebacteriales Corynebacteriaceae Corynebacterium Corynebacterium phoceense 1 9 UHGG
Actinobacteria Actinomycetia Corynebacteriales Corynebacteriaceae Corynebacterium Corynebacterium provencense 1 2 UHGG
Proteobacteria Betaproteobacteria Burkholderiales Sutterellaceae Dakarella Dakarella massiliensis 1 2 UHGG