RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus delbrueckii 4 216 HMP/UHGG
Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus johnsonii 3 61 HMP/UHGG
Actinobacteria Coriobacteriia Coriobacteriales Atopobiaceae Lancefieldella Lancefieldella parvula 2 2 HMP/UHGG
Firmicutes Bacilli Lactobacillales Lactobacillaceae Latilactobacillus Latilactobacillus sakei 1 75 HMP
Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Lentilactobacillus hilgardii 2 10 HMP
Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Lentilactobacillus parafarraginis 1 5 UHGG
Firmicutes Bacilli Bacillales Listeriaceae Listeria Listeria grayi 2 6 HMP/UHGG
Proteobacteria Gammaproteobacteria Methylococcales Methylococcaceae Methylococcus Methylococcus capsulatus 1 7 HMP
Tenericutes Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasmopsis Mycoplasmopsis pulmonis 1 2 HMP
Tenericutes Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasmopsis Mycoplasmopsis synoviae 1 18 HMP