RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella michiganensis 1 384 UHGG
Proteobacteria Gammaproteobacteria Legionellales Legionellaceae Legionella Legionella longbeachae 2 9 HMP
Proteobacteria Deltaproteobacteria Myxococcales Myxococcaceae Myxococcus Myxococcus xanthus 1 19 HMP
Proteobacteria Betaproteobacteria Nitrosomonadales Nitrosomonadaceae Nitrosomonas Nitrosomonas europaea 1 4 HMP
Proteobacteria Gammaproteobacteria Enterobacterales Morganellaceae Providencia Providencia rustigianii 2 9 HMP/UHGG
Proteobacteria Gammaproteobacteria Alteromonadales Shewanellaceae Shewanella Shewanella frigidimarina 1 4 HMP
Cyanobacteria Unknown Synechococcales Acaryochloridaceae Acaryochloris Acaryochloris marina 1 2 HMP
Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides neonati 1 2 UHGG
Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides ovatus 3 150 HMP/UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Citrobacter Citrobacter amalonaticus 1 62 UHGG