RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Firmicutes Clostridia Eubacteriales Oscillospiraceae Acetivibrio Acetivibrio ethanolgignens 1 2 UHGG
Proteobacteria Betaproteobacteria Rhodocyclales Rhodocyclaceae Aromatoleum Aromatoleum aromaticum 1 3 HMP
Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter hominis 2 4 HMP/UHGG
Actinobacteria Actinomycetia Micrococcales Dermatophilaceae Mobilicoccus Mobilicoccus massiliensis 1 2 UHGG
Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria Neisseria meningitidis 5 2190 HMP
Firmicutes Clostridia Eubacteriales Lachnospiraceae Robinsoniella Robinsoniella peoriensis 1 4 UHGG
Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio antiquarius 1 3 HMP
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae Wolinella Wolinella succinogenes 1 2 HMP
Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus coahuilensis 1 3 HMP
Firmicutes Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium ihumii 1 2 UHGG