RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Actinobacteria Actinomycetia Propionibacteriales Propionibacteriaceae Cutibacterium Cutibacterium acnes 5 372 HMP/UHGG
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori 9 2229 HMP/UHGG
Proteobacteria Betaproteobacteria Neisseriales Chromobacteriaceae Laribacter Laribacter hongkongensis 2 50 HMP/UHGG
Firmicutes Bacilli Bacillales Bacillaceae Parageobacillus Parageobacillus thermoglucosidasius 1 14 HMP
Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus equi 2 475 HMP
Actinobacteria Actinomycetia Streptomycetales Streptomycetaceae Streptomyces Streptomyces scabiei 1 15 HMP
Firmicutes Clostridia Eubacteriales Peptostreptococcaceae Terrisporobacter Terrisporobacter glycolicus 1 6 UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Yersiniaceae Yersinia Yersinia intermedia 2 34 HMP/UHGG
Proteobacteria Alphaproteobacteria Sphingomonadales Zymomonadaceae Zymomonas Zymomonas mobilis 2 28 HMP
Synergistetes Synergistia Synergistales Synergistaceae Acetomicrobium Acetomicrobium hydrogeniformans 2 2 HMP/UHGG