| Phylum | Class | Order | Family | Genus | Species | RefIntense Num | Refseq Num | Source |
|---|---|---|---|---|---|---|---|---|
| Actinobacteria | Rubrobacteria | Rubrobacterales | Rubrobacteraceae | Rubrobacter | Rubrobacter xylanophilus | 1 | 3 | HMP |
| Firmicutes | Negativicutes | Acidaminococcales | Acidaminococcaceae | Acidaminococcus | Acidaminococcus fermentans | 2 | 6 | HMP/UHGG |
| Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax citrulli | 1 | 14 | HMP |
| Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides intestinalis | 3 | 33 | HMP/UHGG |
| Proteobacteria | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Bordetella | Bordetella parapertussis | 1 | 94 | HMP |
| Proteobacteria | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | 8 | 2297 | HMP/UHGG |
| Firmicutes | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Dielma | Dielma fastidiosa | 1 | 4 | UHGG |
| Firmicutes | Clostridia | Thermoanaerobacterales | Thermoanaerobacteraceae | Moorella | Moorella thermoacetica | 1 | 16 | HMP |
| Proteobacteria | Gammaproteobacteria | Enterobacterales | Yersiniaceae | Serratia | Serratia liquefaciens | 1 | 25 | UHGG |
| Proteobacteria | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio orientalis | 1 | 2 | HMP |