RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Proteobacteria Betaproteobacteria Burkholderiales Sutterellaceae Turicimonas Turicimonas muris 1 3 UHGG
Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae Xanthomonas Xanthomonas massiliensis 1 2 UHGG
Actinobacteria Actinomycetia Pseudonocardiales Pseudonocardiaceae Amycolatopsis Amycolatopsis mediterranei 1 7 HMP
Firmicutes Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium cadaveris 1 7 UHGG
Firmicutes Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium carboxidivorans 1 3 HMP
Actinobacteria Actinomycetia Corynebacteriales Corynebacteriaceae Corynebacterium Corynebacterium bouchesdurhonense 1 2 UHGG
Actinobacteria Actinomycetia Micrococcales Kytococcaceae Kytococcus Kytococcus sedentarius 1 5 HMP
Proteobacteria Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Mesorhizobium Mesorhizobium japonicum 1 12 HMP
Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria Neisseria macacae 1 2 UHGG
Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides merdae 2 75 HMP/UHGG