RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Proteobacteria Deltaproteobacteria Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio vulgaris 4 4 HMP
Actinobacteria Coriobacteriia Eggerthellales Eggerthellaceae Gordonibacter Gordonibacter urolithinfaciens 1 13 UHGG
Firmicutes Bacilli Bacillales Paenibacillaceae Gorillibacterium Gorillibacterium timonense 1 2 UHGG
Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas protegens 1 77 HMP
Proteobacteria Gammaproteobacteria Enterobacterales Yersiniaceae Serratia Serratia plymuthica 1 30 HMP
Firmicutes Negativicutes Veillonellales Veillonellaceae Veillonella Veillonella magna 1 3 UHGG
Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Vitreoscilla Vitreoscilla massiliensis 1 3 UHGG
Proteobacteria Gammaproteobacteria Aeromonadales Aeromonadaceae Aeromonas Aeromonas dhakensis 1 59 UHGG
Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus subtilis 2 545 HMP/UHGG
Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus thuringiensis 18 715 HMP/UHGG