RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Firmicutes Clostridia Eubacteriales Christensenellaceae Christensenella Christensenella hongkongensis 1 3 UHGG
Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Citromicrobium Citromicrobium bathyomarinum 1 2 HMP
Euryarchaeota Halobacteria Haloferacales Haloferacaceae Haloferax Haloferax massiliensis 1 2 UHGG
Proteobacteria Gammaproteobacteria Chromatiales Halothiobacillaceae Halothiobacillus Halothiobacillus neapolitanus 1 2 HMP
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter canis 1 5 UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella grimontii 1 146 UHGG
Firmicutes Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera elsdenii 1 16 UHGG
Firmicutes Bacilli Bacillales Bacillaceae Numidum Numidum massiliense 1 2 UHGG
Proteobacteria Betaproteobacteria Burkholderiales Oxalobacteraceae Oxalobacter Oxalobacter formigenes 4 7 HMP/UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Yersiniaceae Yersinia Yersinia mollaretii 2 24 HMP/UHGG