RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Firmicutes Clostridia Eubacteriales Peptostreptococcaceae Paeniclostridium Paeniclostridium sordellii 1 59 UHGG
Actinobacteria Actinomycetia Micromonosporales Micromonosporaceae Salinispora Salinispora tropica 1 2 HMP
Firmicutes Clostridia Eubacteriales Clostridiaceae Sarcina Sarcina ventriculi 1 7 UHGG
Firmicutes Negativicutes Veillonellales Veillonellaceae Veillonella Veillonella tobetsuensis 1 4 UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Morganellaceae Xenorhabdus Xenorhabdus bovienii 1 14 HMP
Firmicutes Tissierellia Tissierellales Peptoniphilaceae Anaerococcus Anaerococcus obesiensis 1 2 UHGG
Bacteroidota Bacteroidia Bacteroidales Dysgonomonadaceae Dysgonomonas Dysgonomonas capnocytophagoides 1 2 UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Franconibacter Franconibacter helveticus 1 5 UHGG
Firmicutes Tissierellia Tissierellales Peptoniphilaceae Anaerococcus Anaerococcus vaginalis 2 5 HMP/UHGG
Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus velezensis 1 486 HMP