RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Proteobacteria Gammaproteobacteria Thiotrichales Francisellaceae Francisella Francisella tularensis 2 862 HMP
Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Lactococcus lactis 4 231 HMP/UHGG
Proteobacteria Betaproteobacteria Nitrosomonadales Methylophilaceae Methylovorus Methylovorus glucosotrophus 1 2 HMP
Actinobacteria Actinomycetia Micrococcales Micrococcaceae Paenarthrobacter Paenarthrobacter aurescens 1 2 HMP
Proteobacteria Gammaproteobacteria Enterobacterales Pectobacteriaceae Pectobacterium Pectobacterium parmentieri 1 35 HMP
Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella oris 3 5 HMP/UHGG
Firmicutes Negativicutes Selenomonadales Selenomonadaceae Selenomonas Selenomonas bovis 1 3 UHGG
Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus constellatus 1 28 UHGG
Cyanobacteria Unknown Pseudanabaenales Thermosynechococcaceae Thermosynechococcus Thermosynechococcus vestitus 1 2 HMP
Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus paralicheniformis 1 106 UHGG