RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio fluvialis 1 92 UHGG
Firmicutes Bacilli Lactobacillales Lactobacillaceae Weissella Weissella viridescens 1 9 UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Yersiniaceae Yersinia Yersinia enterocolitica 2 244 HMP/UHGG
Proteobacteria Gammaproteobacteria Moraxellales Moraxellaceae Acinetobacter Acinetobacter pittii 1 341 UHGG
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Actinobacillus Actinobacillus pleuropneumoniae 2 67 HMP
Proteobacteria Gammaproteobacteria Aeromonadales Aeromonadaceae Aeromonas Aeromonas veronii 2 198 UHGG
Proteobacteria Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia carboxidovorans 1 3 HMP
Bacteroidota Bacteroidia Bacteroidales Rikenellaceae Alistipes Alistipes indistinctus 1 4 UHGG
Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Alloscardovia Alloscardovia omnicolens 1 10 UHGG
Proteobacteria Alphaproteobacteria Rickettsiales Anaplasmataceae Anaplasma Anaplasma marginale 1 20 HMP