RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus licheniformis 2 222 HMP/UHGG
Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides cellulosilyticus 2 47 HMP/UHGG
Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides eggerthii 2 48 HMP/UHGG
Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides pyogenes 1 24 UHGG
Proteobacteria Alphaproteobacteria Hyphomicrobiales Bartonellaceae Bartonella Bartonella henselae 1 38 HMP
Proteobacteria Oligoflexia Bdellovibrionales Bdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus 1 7 HMP
Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium dentium 4 44 HMP/UHGG
Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium gallicum 2 4 HMP/UHGG
Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium pullorum 2 14 UHGG
Firmicutes Clostridia Eubacteriales Lachnospiraceae Blautia Blautia obeum 3 55 HMP/UHGG