RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Actinobacteria Actinomycetia Propionibacteriales Propionibacteriaceae Cutibacterium Cutibacterium avidum 1 40 UHGG
Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus gilvus 1 5 UHGG
Firmicutes Clostridia Eubacteriales Lachnospiraceae Fusicatenibacter Fusicatenibacter saccharivorans 1 33 UHGG
Proteobacteria Alphaproteobacteria Rhodospirillales Acetobacteraceae Gluconobacter Gluconobacter oxydans 1 18 HMP
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella quasivariicola 1 18 UHGG
Proteobacteria Alphaproteobacteria Hyphomicrobiales Rhizobiaceae Liberibacter Candidatus Liberibacter asiaticus 1 34 HMP
Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter oralis 1 5 UHGG
Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera cuniculi 1 2 UHGG
Proteobacteria Betaproteobacteria Nitrosomonadales Methylophilaceae Methylotenera Methylotenera mobilis 1 2 HMP
Proteobacteria Gammaproteobacteria Moraxellales Moraxellaceae Moraxella Moraxella catarrhalis 1 209 HMP