RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Proteobacteria Gammaproteobacteria Alteromonadales Shewanellaceae Shewanella Shewanella halifaxensis 1 2 HMP
Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus mitis 4 163 HMP/UHGG
Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus timonensis 1 2 UHGG
Proteobacteria Betaproteobacteria Burkholderiales Sutterellaceae Sutterella Sutterella wadsworthensis 2 28 UHGG
Spirochaetes Spirochaetia Spirochaetales Treponemataceae Treponema Treponema denticola 1 31 HMP
Firmicutes Negativicutes Veillonellales Veillonellaceae Veillonella Veillonella atypica 1 14 UHGG
Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio atlanticus 1 5 HMP
Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio vulnificus 2 275 HMP/UHGG
Firmicutes Bacilli Lactobacillales Lactobacillaceae Weissella Weissella cibaria 1 68 UHGG
Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae Xanthomonas Xanthomonas euvesicatoria 1 101 HMP