RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Proteobacteria Gammaproteobacteria Enterobacterales Yersiniaceae Yersinia Yersinia aleksiciae 1 10 UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Yersiniaceae Yersinia Yersinia frederiksenii 3 35 HMP/UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Yokenella Yokenella regensburgei 1 11 UHGG
Proteobacteria Gammaproteobacteria Moraxellales Moraxellaceae Acinetobacter Acinetobacter oleivorans 1 36 HMP
Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Actinomyces Actinomyces graevenitzii 2 3 UHGG
Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium pseudocatenulatum 2 133 HMP/UHGG
Firmicutes Clostridia Eubacteriales Oscillospiraceae Bittarella Bittarella massiliensis 1 7 UHGG
Proteobacteria Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter segnis 1 4 HMP
Firmicutes Negativicutes Veillonellales Veillonellaceae Dialister Dialister succinatiphilus 1 2 UHGG
Fusobacteria Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium massiliense 1 2 UHGG