RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Lactococcus garvieae 2 48 UHGG
Bacteroidota Bacteroidia Bacteroidales Odoribacteraceae Odoribacter Odoribacter laneus 1 3 UHGG
Proteobacteria Alphaproteobacteria Rickettsiales Rickettsiaceae Orientia Orientia tsutsugamushi 2 17 HMP
Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae Pelistega Pelistega indica 1 2 UHGG
Firmicutes Bacilli Bacillales Bacillaceae Robertmurraya Robertmurraya massiliosenegalensis 1 2 UHGG
Actinobacteria Actinomycetia Pseudonocardiales Pseudonocardiaceae Saccharopolyspora Saccharopolyspora erythraea 1 7 HMP
Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus gallolyticus 2 33 HMP
Thermotogae Thermotogae Thermotogales Thermotogaceae Thermotoga Thermotoga maritima 1 6 HMP
Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Winkia Winkia neuii 1 6 UHGG
Firmicutes Clostridia Eubacteriales Eubacteriaceae Eubacterium Eubacterium ramulus 2 10 UHGG