| Phylum | Class | Order | Family | Genus | Species | RefIntense Num | Refseq Num | Source |
|---|---|---|---|---|---|---|---|---|
| Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum seropedicae | 1 | 6 | HMP |
| Firmicutes | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus gallinarum | 1 | 8 | UHGG |
| Firmicutes | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus helveticus | 2 | 160 | HMP/UHGG |
| Proteobacteria | Gammaproteobacteria | Enterobacterales | Budviciaceae | Leminorella | Leminorella richardii | 1 | 2 | UHGG |
| Firmicutes | Bacilli | Lactobacillales | Lactobacillaceae | Limosilactobacillus | Limosilactobacillus oris | 1 | 5 | UHGG |
| Proteobacteria | Betaproteobacteria | Nitrosomonadales | Methylophilaceae | Methylotenera | Methylotenera versatilis | 1 | 3 | HMP |
| Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Pedobacter | Pedobacter heparinus | 1 | 2 | HMP |
| Bacteroidota | Bacteroidia | Bacteroidales | Prevotellaceae | Prevotella | Prevotella intermedia | 1 | 34 | UHGG |
| Proteobacteria | Gammaproteobacteria | Enterobacterales | Morganellaceae | Providencia | Providencia stuartii | 2 | 57 | HMP/UHGG |
| Proteobacteria | Deltaproteobacteria | Myxococcales | Polyangiaceae | Sorangium | Sorangium cellulosum | 1 | 6 | HMP |