RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Proteobacteria Betaproteobacteria Burkholderiales Oxalobacteraceae Herbaspirillum Herbaspirillum seropedicae 1 6 HMP
Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus gallinarum 1 8 UHGG
Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus helveticus 2 160 HMP/UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Budviciaceae Leminorella Leminorella richardii 1 2 UHGG
Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Limosilactobacillus oris 1 5 UHGG
Proteobacteria Betaproteobacteria Nitrosomonadales Methylophilaceae Methylotenera Methylotenera versatilis 1 3 HMP
Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter heparinus 1 2 HMP
Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella intermedia 1 34 UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Morganellaceae Providencia Providencia stuartii 2 57 HMP/UHGG
Proteobacteria Deltaproteobacteria Myxococcales Polyangiaceae Sorangium Sorangium cellulosum 1 6 HMP