RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Citrobacter Citrobacter braakii 1 101 UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella pneumoniae 2 13935 HMP/UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Budviciaceae Leminorella Leminorella grimontii 1 4 UHGG
Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Limosilactobacillus vaginalis 3 11 HMP/UHGG
Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Paraburkholderia Paraburkholderia atlantica 1 7 HMP
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli 36 29876 HMP/UHGG
Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia ambifaria 3 85 HMP
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Citrobacter Citrobacter werkmanii 2 46 UHGG
Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae Stenotrophomonas Stenotrophomonas maltophilia 4 670 HMP/UHGG
Lentisphaerae Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis 2 3 HMP/UHGG