RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae Bordetella Bordetella pertussis 1 862 HMP
Firmicutes Clostridia Thermoanaerobacterales Thermoanaerobacterales Family III. Incertae Sedis Caldicellulosiruptor Caldicellulosiruptor bescii 1 18 HMP
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Citrobacter Citrobacter europaeus 1 10 UHGG
Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus pasteurianus 1 16 UHGG
Proteobacteria Gammaproteobacteria Xanthomonadales Xanthomonadaceae Xanthomonas Xanthomonas citri 3 201 HMP
Proteobacteria Deltaproteobacteria Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter dehalogenans 1 2 HMP
Proteobacteria Gammaproteobacteria Enterobacterales Yersiniaceae Serratia Serratia ureilytica 1 90 UHGG
Proteobacteria Alphaproteobacteria Hyphomicrobiales Rhizobiaceae Sinorhizobium Sinorhizobium meliloti 1 241 HMP
Deinococcus-Thermus Deinococci Thermales Thermaceae Thermus Thermus thermophilus 1 26 HMP
Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae Bordetella Bordetella bronchiseptica 1 97 HMP