RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides graminisolvens 1 2 UHGG
Proteobacteria Deltaproteobacteria Desulfovibrionales Desulfovibrionaceae Bilophila Bilophila wadsworthia 1 5 UHGG
Firmicutes Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium baratii 1 14 UHGG
Firmicutes Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium cochlearium 1 11 UHGG
Firmicutes Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium kluyveri 1 3 HMP
Firmicutes Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium senegalense 1 4 UHGG
Firmicutes Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium septicum 1 6 UHGG
Firmicutes Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium tetani 2 43 HMP/UHGG
Bacteroidota Bacteroidia Bacteroidales Barnesiellaceae Coprobacter Coprobacter fastidiosus 1 4 UHGG
Firmicutes Bacilli Lactobacillales Lactobacillaceae Leuconostoc Leuconostoc citreum 2 33 HMP/UHGG