RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Firmicutes Bacilli Bacillales Bacillaceae Peribacillus Peribacillus simplex 1 17 UHGG
Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Croceibacter Croceibacter atlanticus 1 2 HMP
Firmicutes Clostridia Eubacteriales Clostridiaceae Butyricicoccus Butyricicoccus pullicaecorum 1 6 UHGG
Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter lanienae 1 31 UHGG
Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga Capnocytophaga ochracea 2 9 HMP/UHGG
Chlamydiae Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia muridarum 3 31 HMP
Firmicutes Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium celatum 1 4 UHGG
Firmicutes Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium paraputrificum 1 23 UHGG
Firmicutes Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium tertium 1 11 UHGG
Firmicutes Clostridia Eubacteriales Lachnospiraceae Coprococcus Coprococcus catus 1 9 UHGG