RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Firmicutes Clostridia Eubacteriales Lachnospiraceae Enterocloster Enterocloster bolteae 2 35 HMP/UHGG
Firmicutes Clostridia Eubacteriales Peptostreptococcaceae Peptostreptococcus Peptostreptococcus anaerobius 2 10 HMP/UHGG
Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella corporis 1 3 UHGG
Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella stercorea 1 8 UHGG
Proteobacteria Gammaproteobacteria Moraxellales Moraxellaceae Psychrobacter Psychrobacter cryohalolentis 1 3 HMP
Actinobacteria Actinomycetia Micrococcales Micrococcaceae Renibacterium Renibacterium salmoninarum 1 3 HMP
Firmicutes Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Solobacterium Solobacterium moorei 1 4 UHGG
Firmicutes Clostridia Eubacteriales Lachnospiraceae Anaerobutyricum Anaerobutyricum hallii 3 16 HMP/UHGG
Firmicutes Tissierellia Tissierellales Peptoniphilaceae Anaerococcus Anaerococcus lactolyticus 2 2 HMP/UHGG
Firmicutes Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium tepidum 1 4 UHGG