RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus raffinosus 1 10 UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Erwiniaceae Erwinia Erwinia amylovora 2 236 HMP
Firmicutes Clostridia Eubacteriales Unknown Fenollaria Fenollaria massiliensis 1 2 UHGG
Acidobacteria Acidobacteriia Acidobacteriales Acidobacteriaceae Granulicella Granulicella mallensis 1 2 HMP
Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae Grimontia Grimontia hollisae 2 10 HMP/UHGG
Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pullorum 2 23 HMP/UHGG
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Histophilus Histophilus somni 1 58 HMP
Firmicutes Bacilli Bacillales Planococcaceae Kurthia Kurthia senegalensis 1 2 UHGG
Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus iners 3 68 HMP/UHGG
Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus intestinalis 1 10 UHGG