RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Lactococcus cremoris 1 66 HMP
Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Limosilactobacillus reuteri 6 325 HMP
Tenericutes Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma capricolum 1 29 HMP
Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria Neisseria subflava 2 3 HMP/UHGG
Actinobacteria Coriobacteriia Coriobacteriales Coriobacteriaceae Olegusella Olegusella massiliensis 1 2 UHGG
Firmicutes Clostridia Eubacteriales Lachnospiraceae Oribacterium Oribacterium sinus 3 2 HMP/UHGG
Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus 2 333 HMP
Firmicutes Bacilli Bacillales Bacillaceae Rubeoparvulum Rubeoparvulum massiliense 1 2 UHGG
Firmicutes Bacilli Lactobacillales Lactobacillaceae Schleiferilactobacillus Schleiferilactobacillus harbinensis 1 8 UHGG
Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus lugdunensis 2 93 HMP/UHGG