RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Tenericutes Mollicutes Mycoplasmatales Mycoplasmataceae Mesomycoplasma Mesomycoplasma hyopneumoniae 1 25 HMP
Actinobacteria Actinomycetia Actinomycetales Actinomycetaceae Mobiluncus Mobiluncus mulieris 3 20 HMP
Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Muribaculum Muribaculum intestinale 1 11 UHGG
Tenericutes Unknown Mycoplasmoidales Metamycoplasmataceae Mycoplasmoides Mycoplasmoides gallisepticum 1 31 HMP
Cyanobacteria Unknown Nostocales Nostocaceae Nostoc Nostoc punctiforme 1 2 HMP
Proteobacteria Betaproteobacteria Burkholderiales Oxalobacteraceae Noviherbaspirillum Noviherbaspirillum massiliense 1 2 UHGG
Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus odorifer 1 34 UHGG
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Pasteurella multocida 1 363 HMP
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Plesiomonas Plesiomonas shigelloides 1 28 UHGG
Actinobacteria Actinomycetia Micrococcales Micrococcaceae Rothia Rothia mucilaginosa 7 23 HMP/UHGG