RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Firmicutes Clostridia Eubacteriales Unknown Intestinimonas Intestinimonas massiliensis 1 5 UHGG
Firmicutes Clostridia Eubacteriales Lachnospiraceae Lachnoanaerobaculum Lachnoanaerobaculum umeaense 1 3 UHGG
Firmicutes Tissierellia Tissierellales Peptoniphilaceae Lagierella Lagierella massiliensis 1 2 UHGG
Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Limosilactobacillus fermentum 5 111 HMP/UHGG
Deinococcus-Thermus Deinococci Thermales Thermaceae Meiothermus Meiothermus ruber 1 4 HMP
Tenericutes Mollicutes Entomoplasmatales Entomoplasmataceae Mesoplasma Mesoplasma florum 1 12 HMP
Actinobacteria Actinomycetia Corynebacteriales Mycobacteriaceae Mycolicibacterium Mycolicibacterium smegmatis 1 63 HMP
Tenericutes Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasmopsis Mycoplasmopsis agalactiae 2 16 HMP
Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus lautus 1 10 UHGG
Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus rubinfantis 1 2 UHGG