RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Cupriavidus Cupriavidus metallidurans 1 15 UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Enterobacter Enterobacter ludwigii 1 91 UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia marmotae 1 56 UHGG
Proteobacteria Deltaproteobacteria Desulfuromonadales Geobacteraceae Geobacter Geobacter metallireducens 1 2 HMP
Proteobacteria Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum extorquens 3 15 HMP
Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus senegalimassiliensis 1 2 UHGG
Proteobacteria Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Rhodopseudomonas Rhodopseudomonas palustris 6 17 HMP
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Citrobacter Citrobacter sedlakii 1 8 UHGG
Actinobacteria Actinomycetia Corynebacteriales Corynebacteriaceae Corynebacterium Corynebacterium urealyticum 1 11 HMP
Proteobacteria Alphaproteobacteria Rhodobacterales Roseobacteraceae Dinoroseobacter Dinoroseobacter shibae 1 3 HMP