RI taxonomy and genome coverage

This table lists RI species with available PrimerBac primer records. Select a species to view its candidate primer pairs. The complete RI sequence and taxonomy files are available on the Download page.

Phylum Class Order Family Genus Species RI genomes RefSeq genomes Source
Tenericutes Unknown Mycoplasmoidales Metamycoplasmataceae Mycoplasmoides Mycoplasmoides pneumoniae 2 181 HMP
Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 2 165 HMP/UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Phytobacter Phytobacter massiliensis 1 2 UHGG
Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides gallinarum 1 2 UHGG
Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae Bordetella Bordetella petrii 1 5 HMP
Proteobacteria Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus Haemophilus pittmaniae 1 3 UHGG
Actinobacteria Actinomycetia Micrococcales Micrococcaceae Nesterenkonia Nesterenkonia massiliensis 1 2 UHGG
Firmicutes Clostridia Eubacteriales Oscillospiraceae Provencibacterium Provencibacterium massiliense 1 2 UHGG
Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella flexneri 2 738 HMP
Proteobacteria Gammaproteobacteria Aeromonadales Aeromonadaceae Aeromonas Aeromonas caviae 1 185 UHGG